STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_018099Beta-soluble NSF attachment protein. (281 aa)    
Predicted Functional Partners:
Vti1a
Vesicle transport through interaction with t-SNAREs-like 1A.
    
 0.965
Stx16
Syntaxin-16; Belongs to the syntaxin family.
    
 0.949
Scfd1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.949
Ykt6
Synaptobrevin-like YKT6; Belongs to the synaptobrevin family.
    
 0.940
Vamp1
Vesicle-associated membrane protein 1.
   
 0.937
Gak
Cyclin G-associated kinase.
    
 0.926
Vamp8
Vesicle-associated membrane protein 8.
   
 0.906
I79_004066
Vesicle transport through interaction with t-SNAREs-like 1B.
    
 0.899
I79_000431
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.896
Stx6
Syntaxin-6; Belongs to the syntaxin family.
    
 0.889
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.