STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_018336Pleiotropic regulator 1. (99 aa)    
Predicted Functional Partners:
I79_021945
Pre-mRNA-processing factor 19.
   
 0.868
Cwc15
Protein CWC15-like.
   
 0.864
Ctnnbl1
Beta-catenin-like protein 1.
   
 0.822
Bcas2
Pre-mRNA-splicing factor SPF27.
   
 0.789
H671_1g3186
Pre-mRNA-splicing factor SPF27-like protein.
   
 0.789
Crnkl1
Crooked neck-like protein 1.
   
 
 0.763
Snw1
SNW domain-containing protein 1.
   
 
 0.760
Bud31
Protein BUD31-like.
   
 
 0.755
Xab2
Pre-mRNA-splicing factor SYF1.
   
 
 0.743
Eftud2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.741
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.