STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_019141Melanoma-associated antigen B18. (339 aa)    
Predicted Functional Partners:
I79_022224
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.636
Nsmce1
Non-structural maintenance of chromosomes element 1-like.
    
 0.623
I79_026101
E3 SUMO-protein ligase NSE2.
    
 0.587
I79_022532
Structural maintenance of chromosomes protein 5.
   
 0.496
Smc5
Structural maintenance of chromosomes protein 5.
   
 0.496
I79_009767
Structural maintenance of chromosomes protein 6.
   
 0.466
Smc6
Structural maintenance of chromosomes protein 6.
   
 0.466
I79_010245
Structural maintenance of chromosomes protein 6.
   
 0.466
I79_023826
Structural maintenance of chromosomes protein 3.
    
 0.401
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.