STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_019401Calpain-7-like protein; Belongs to the peptidase C2 family. (265 aa)    
Predicted Functional Partners:
I79_019402
Calpain-7-like protein.
 
     0.924
Ncapd3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.639
I79_002116
Ubiquitin carboxyl-terminal hydrolase 12.
      
 0.639
I79_009361
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase.
      
 0.639
I79_009362
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase.
      
 0.639
I79_015043
Ubiquitin carboxyl-terminal hydrolase 12; Belongs to the peptidase C19 family.
      
 0.639
Dst
Bullous pemphigoid antigen 1, isoforms 1/2/3/4.
    
 
 0.638
Itsn2
Intersectin-2.
   
 
  0.582
Tmem43
Transmembrane protein 43.
      
 0.532
Atp5f1d
ATP synthase subunit delta, mitochondrial.
      
 0.530
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.