STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_019429Contactin-1. (461 aa)    
Predicted Functional Partners:
Cntnap1
Contactin-associated protein 1.
   
 0.979
I79_007578
Neurofascin.
   
0.945
Ptprz1
Receptor-type tyrosine-protein phosphatase zeta.
   
 0.917
L1cam
Neural cell adhesion molecule L1.
   
0.741
I79_006349
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.683
App
Amyloid beta A4 protein.
   
 
 0.646
I79_003700
Neuronal cell adhesion molecule.
   
0.639
H671_4g12830
Contactin-5-like protein.
 
 
  
 0.638
Chl1
Neural cell adhesion molecule L1-like protein.
   
 0.624
Prnp
Major prion protein; Belongs to the prion family.
    
 0.613
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.