STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srp54Signal recognition particle 54 kDa protein. (272 aa)    
Predicted Functional Partners:
Srp68
Signal recognition particle 68 kDa protein.
    
 0.995
Srp72
Signal recognition particle 72 kDa protein.
   
 0.994
Srp14
Signal recognition particle 14 kDa protein.
    
 0.992
I79_014676
Signal recognition particle 19 kDa protein.
   
 0.980
Srpra
Signal recognition particle receptor subunit alpha.
  
0.954
Mrpl19
39S ribosomal protein L19, mitochondrial.
  
 
 0.898
I79_003224
Signal recognition particle receptor subunit beta.
   
 
 0.894
I79_000086
Bifunctional aminoacyl-tRNA synthetase.
  
 
 0.879
Mrpl21
39S ribosomal protein L21, mitochondrial.
  
 
 0.878
I79_012295
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.865
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.