STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_020072Latent-transforming growth factor beta-binding protein 2. (52 aa)    
Predicted Functional Partners:
Tgfb1
Transforming growth factor beta-1.
   
 0.790
I79_000092
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.715
Tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.615
I79_014637
Muscle M-line assembly protein unc-89.
   
 0.542
Itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.492
I79_013556
Fibrillin-1.
   
 
 0.454
Fkbp10
Peptidylprolyl isomerase.
   
 0.450
Loxl1
Lysyl oxidase-like 1.
   
  
 0.439
Copz2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
    
 
 0.429
I79_019127
Integrin beta; Belongs to the integrin beta chain family.
    
 0.426
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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