Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Copz2 | Fkbp10 | G3H5T9 | G3HLV1 | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | Peptidylprolyl isomerase. | 0.619 |
Copz2 | I79_013556 | G3H5T9 | G3HRT4 | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | Fibrillin-1. | 0.463 |
Copz2 | I79_020072 | G3H5T9 | G3I939 | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | Latent-transforming growth factor beta-binding protein 2. | 0.429 |
Copz2 | Tgfb3 | G3H5T9 | G3HFS5 | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.465 |
Fkbp10 | Copz2 | G3HLV1 | G3H5T9 | Peptidylprolyl isomerase. | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | 0.619 |
Fkbp10 | I79_013556 | G3HLV1 | G3HRT4 | Peptidylprolyl isomerase. | Fibrillin-1. | 0.553 |
Fkbp10 | I79_020072 | G3HLV1 | G3I939 | Peptidylprolyl isomerase. | Latent-transforming growth factor beta-binding protein 2. | 0.450 |
Fkbp10 | Tgfb3 | G3HLV1 | G3HFS5 | Peptidylprolyl isomerase. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.514 |
I79_000092 | I79_013556 | G3GRE7 | G3HRT4 | Transforming growth factor beta; Belongs to the TGF-beta family. | Fibrillin-1. | 0.554 |
I79_000092 | I79_019127 | G3GRE7 | G3I6K3 | Transforming growth factor beta; Belongs to the TGF-beta family. | Integrin beta; Belongs to the integrin beta chain family. | 0.696 |
I79_000092 | I79_020072 | G3GRE7 | G3I939 | Transforming growth factor beta; Belongs to the TGF-beta family. | Latent-transforming growth factor beta-binding protein 2. | 0.715 |
I79_000092 | Itgb6 | G3GRE7 | G3H8K4 | Transforming growth factor beta; Belongs to the TGF-beta family. | Integrin beta; Belongs to the integrin beta chain family. | 0.705 |
I79_000092 | Tgfb1 | G3GRE7 | G3IA12 | Transforming growth factor beta; Belongs to the TGF-beta family. | Transforming growth factor beta-1. | 0.740 |
I79_000092 | Tgfb3 | G3GRE7 | G3HFS5 | Transforming growth factor beta; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.722 |
I79_013556 | Copz2 | G3HRT4 | G3H5T9 | Fibrillin-1. | Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. | 0.463 |
I79_013556 | Fkbp10 | G3HRT4 | G3HLV1 | Fibrillin-1. | Peptidylprolyl isomerase. | 0.553 |
I79_013556 | I79_000092 | G3HRT4 | G3GRE7 | Fibrillin-1. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.554 |
I79_013556 | I79_014637 | G3HRT4 | G3HUM6 | Fibrillin-1. | Muscle M-line assembly protein unc-89. | 0.542 |
I79_013556 | I79_020072 | G3HRT4 | G3I939 | Fibrillin-1. | Latent-transforming growth factor beta-binding protein 2. | 0.454 |
I79_013556 | Itgb6 | G3HRT4 | G3H8K4 | Fibrillin-1. | Integrin beta; Belongs to the integrin beta chain family. | 0.614 |
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