STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cops4COP9 signalosome complex subunit 4. (406 aa)    
Predicted Functional Partners:
Gps1
COP9 signalosome complex subunit 1.
   
 0.999
Cops3
COP9 signalosome complex subunit 3.
   
 0.999
Cops6
COP9 signalosome complex subunit 6.
   
 0.999
Cops5
COP9 signalosome complex subunit 5.
   
 0.999
Cops8
COP9 signalosome complex subunit 8.
   
 0.999
Cops7a
COP9 signalosome complex subunit 7a.
   
 0.988
I79_023129
COP9 signalosome complex subunit 7b.
   
 0.988
Nedd8
NEDD8.
   
 0.965
Ddb1
DNA damage-binding protein 1.
    
 0.943
Cul2
Cullin-2; Belongs to the cullin family.
   
 0.906
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.