STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rhbdf1Rhomboid family member 1. (856 aa)    
Predicted Functional Partners:
I79_023268
Disintegrin and metalloproteinase domain-containing protein 17.
    
 0.619
Stoml1
Stomatin-like protein 1.
  
 0.463
Mthfsd
Methenyltetrahydrofolate synthetase domain-containing protein.
  
    0.453
Mthfs
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.453
Phb2
Prohibitin-2.
   
 0.435
Adam10
Disintegrin and metalloproteinase domain-containing protein 10.
    
 0.432
Nprl3
UPF0171 protein C16orf35-like.
      
 0.418
I79_021501
Caseinolytic peptidase B protein-like.
  
  
 0.412
H671_3g8729
AFG3-like protein 1.
  
 
 0.403
Spg7
Paraplegin.
  
 
 0.403
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.