STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_020794Putative E3 ubiquitin-protein ligase HERC3. (461 aa)    
Predicted Functional Partners:
Herc6
Putative E3 ubiquitin-protein ligase HERC6.
 
  
 
 0.908
I79_019148
Putative E3 ubiquitin-protein ligase HERC3.
 
      0.813
Isg15
Ubiquitin-like protein ISG15-like protein.
   
 0.676
Trip12
Putative E3 ubiquitin-protein ligase TRIP12.
   
 
 0.631
Ube2l6
Ubiquitin/ISG15-conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.488
Psmd4
26S proteasome non-ATPase regulatory subunit 4.
    
 
 0.449
I79_004383
Ubiquitin-conjugating enzyme E2 L3.
   
 0.440
Ube2l3
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.440
Ube2n
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.422
Uba7
Ubiquitin-like modifier-activating enzyme 7.
   
 0.413
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.