Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I79_002649 | I79_005238 | G3GXZ9 | G3H4N3 | Actin-related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.909 |
I79_002649 | I79_016646 | G3GXZ9 | G3HZY1 | Actin-related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.909 |
I79_002649 | I79_021392 | G3GXZ9 | G3ICJ4 | Actin-related protein 5; Belongs to the actin family. | Uncharacterized protein. | 0.609 |
I79_002649 | Ino80c | G3GXZ9 | G3H9N3 | Actin-related protein 5; Belongs to the actin family. | INO80 complex subunit C protein. | 0.998 |
I79_002649 | Ruvbl1 | G3GXZ9 | G3HIC5 | Actin-related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.998 |
I79_005238 | I79_002649 | G3H4N3 | G3GXZ9 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | Actin-related protein 5; Belongs to the actin family. | 0.909 |
I79_005238 | I79_021392 | G3H4N3 | G3ICJ4 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | Uncharacterized protein. | 0.434 |
I79_005238 | Ino80c | G3H4N3 | G3H9N3 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | INO80 complex subunit C protein. | 0.945 |
I79_005238 | Ruvbl1 | G3H4N3 | G3HIC5 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.994 |
I79_016646 | I79_002649 | G3HZY1 | G3GXZ9 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | Actin-related protein 5; Belongs to the actin family. | 0.909 |
I79_016646 | I79_021392 | G3HZY1 | G3ICJ4 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | Uncharacterized protein. | 0.434 |
I79_016646 | Ino80c | G3HZY1 | G3H9N3 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | INO80 complex subunit C protein. | 0.945 |
I79_016646 | Ruvbl1 | G3HZY1 | G3HIC5 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.994 |
I79_021392 | I79_002649 | G3ICJ4 | G3GXZ9 | Uncharacterized protein. | Actin-related protein 5; Belongs to the actin family. | 0.609 |
I79_021392 | I79_005238 | G3ICJ4 | G3H4N3 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.434 |
I79_021392 | I79_016646 | G3ICJ4 | G3HZY1 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.434 |
I79_021392 | Ino80c | G3ICJ4 | G3H9N3 | Uncharacterized protein. | INO80 complex subunit C protein. | 0.525 |
I79_021392 | Ruvbl1 | G3ICJ4 | G3HIC5 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.612 |
Ino80c | I79_002649 | G3H9N3 | G3GXZ9 | INO80 complex subunit C protein. | Actin-related protein 5; Belongs to the actin family. | 0.998 |
Ino80c | I79_005238 | G3H9N3 | G3H4N3 | INO80 complex subunit C protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.945 |
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