Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdk5rap3 | I79_005032 | G3H5U0 | G3H437 | CDK5 regulatory subunit-associated protein 3. | DDRGK domain-containing protein 1. | 0.949 |
Cdk5rap3 | Uba5 | G3H5U0 | G3GZH1 | CDK5 regulatory subunit-associated protein 3. | Ubiquitin-like modifier-activating enzyme 5. | 0.566 |
Cdk5rap3 | Ufc1 | G3H5U0 | G3HU13 | CDK5 regulatory subunit-associated protein 3. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.614 |
Cdk5rap3 | Ufsp1 | G3H5U0 | G3IGS9 | CDK5 regulatory subunit-associated protein 3. | Ufm1-specific protease 1. | 0.418 |
I79_005032 | Cdk5rap3 | G3H437 | G3H5U0 | DDRGK domain-containing protein 1. | CDK5 regulatory subunit-associated protein 3. | 0.949 |
I79_005032 | Uba5 | G3H437 | G3GZH1 | DDRGK domain-containing protein 1. | Ubiquitin-like modifier-activating enzyme 5. | 0.577 |
I79_005032 | Ufc1 | G3H437 | G3HU13 | DDRGK domain-containing protein 1. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.782 |
I79_005032 | Ufsp1 | G3H437 | G3IGS9 | DDRGK domain-containing protein 1. | Ufm1-specific protease 1. | 0.518 |
Odr4 | Ufsp1 | G3GWV8 | G3IGS9 | Protein odr-4-like. | Ufm1-specific protease 1. | 0.515 |
Uba5 | Cdk5rap3 | G3GZH1 | G3H5U0 | Ubiquitin-like modifier-activating enzyme 5. | CDK5 regulatory subunit-associated protein 3. | 0.566 |
Uba5 | I79_005032 | G3GZH1 | G3H437 | Ubiquitin-like modifier-activating enzyme 5. | DDRGK domain-containing protein 1. | 0.577 |
Uba5 | Ufc1 | G3GZH1 | G3HU13 | Ubiquitin-like modifier-activating enzyme 5. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.991 |
Uba5 | Ufsp1 | G3GZH1 | G3IGS9 | Ubiquitin-like modifier-activating enzyme 5. | Ufm1-specific protease 1. | 0.568 |
Ufc1 | Cdk5rap3 | G3HU13 | G3H5U0 | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | CDK5 regulatory subunit-associated protein 3. | 0.614 |
Ufc1 | I79_005032 | G3HU13 | G3H437 | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | DDRGK domain-containing protein 1. | 0.782 |
Ufc1 | Uba5 | G3HU13 | G3GZH1 | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | Ubiquitin-like modifier-activating enzyme 5. | 0.991 |
Ufc1 | Ufsp1 | G3HU13 | G3IGS9 | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | Ufm1-specific protease 1. | 0.584 |
Ufsp1 | Cdk5rap3 | G3IGS9 | G3H5U0 | Ufm1-specific protease 1. | CDK5 regulatory subunit-associated protein 3. | 0.418 |
Ufsp1 | I79_005032 | G3IGS9 | G3H437 | Ufm1-specific protease 1. | DDRGK domain-containing protein 1. | 0.518 |
Ufsp1 | Odr4 | G3IGS9 | G3GWV8 | Ufm1-specific protease 1. | Protein odr-4-like. | 0.515 |
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