STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NsdhlSterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating. (208 aa)    
Predicted Functional Partners:
Hsd17b7
3-keto-steroid reductase.
   
 0.992
Msmo1
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
  
 0.988
I79_002454
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
 
 
 0.947
Lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
 
 
 0.929
I79_023549
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating.
 
     0.921
Fdft1
Squalene synthetase.
  
 
 0.920
Hmgcs1
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.854
I79_012295
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.854
I79_018235
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.854
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.854
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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