STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_023556CCR4-NOT transcription complex subunit 6-like. (431 aa)    
Predicted Functional Partners:
Cnot7
CCR4-NOT transcription complex subunit 7-like isoform 1.
    
 0.974
Cnot1
CCR4-NOT transcription complex subunit 1.
   
 0.939
I79_017776
CCR4-NOT transcription complex subunit 1.
   
 0.939
Cnot8
CCR4-NOT transcription complex subunit 8.
    
 0.937
I79_023104
CCR4-NOT transcription complex subunit 2.
    
 0.928
I79_017848
CCR4-NOT transcription complex subunit 3.
    
 0.927
Cnot9
Cell differentiation protein RCD1-like.
    
 0.921
Cnot11
Uncharacterized protein C2orf29-like.
    
 0.887
Cnot10
CCR4-NOT transcription complex subunit 10.
    
 0.882
Cnot4
CCR4-NOT transcription complex subunit 4.
    
 0.868
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.