STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nlrp6NACHT, LRR and PYD domains-containing protein 6. (995 aa)    
Predicted Functional Partners:
I79_019425
Apoptosis-associated speck-like protein containing a CARD.
   
0.963
Nlrc4
NLR family CARD domain-containing protein 4.
   
 
 0.886
I79_017574
Caspase-12; Belongs to the peptidase C14A family.
   
 0.756
I79_021790
Acid trehalase-like protein 1.
 
    
 0.725
H671_7g18521
Pyrin-like protein.
   
 0.724
Pgghg
Acid trehalase-like protein 1.
 
    
 0.719
Dhx15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 
 0.716
I79_006506
Interferon-inducible protein AIM2.
   
 
 0.682
I79_022204
NACHT, LRR and PYD domains-containing protein 2.
      
0.664
I79_025295
NACHT, LRR and PYD domains-containing protein 12.
      
 0.659
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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