Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I79_022036 | Prdx1 | G3IE92 | G3GYP9 | Peroxiredoxin-2. | Peroxiredoxin-1. | 0.531 |
I79_022036 | Prdx5 | G3IE92 | G3I887 | Peroxiredoxin-2. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.900 |
I79_022036 | Txn2 | G3IE92 | G3IMT0 | Peroxiredoxin-2. | Thioredoxin, mitochondrial. | 0.799 |
Mrpl11 | Polr2b | G3I2H2 | G3I8Y5 | 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.943 |
Mrpl11 | Txn2 | G3I2H2 | G3IMT0 | 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family. | Thioredoxin, mitochondrial. | 0.810 |
Msra | Polr2b | G3H0K4 | G3I8Y5 | Peptide methionine sulfoxide reductase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.494 |
Msra | Prdx5 | G3H0K4 | G3I887 | Peptide methionine sulfoxide reductase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.526 |
Msra | Txn2 | G3H0K4 | G3IMT0 | Peptide methionine sulfoxide reductase. | Thioredoxin, mitochondrial. | 0.905 |
Polr2b | Mrpl11 | G3I8Y5 | G3I2H2 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family. | 0.943 |
Polr2b | Msra | G3I8Y5 | G3H0K4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Peptide methionine sulfoxide reductase. | 0.494 |
Polr2b | Txn2 | G3I8Y5 | G3IMT0 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Thioredoxin, mitochondrial. | 0.807 |
Prdx1 | I79_022036 | G3GYP9 | G3IE92 | Peroxiredoxin-1. | Peroxiredoxin-2. | 0.531 |
Prdx1 | Prdx2 | G3GYP9 | G3HCW9 | Peroxiredoxin-1. | Peroxiredoxin-2. | 0.516 |
Prdx1 | Prdx5 | G3GYP9 | G3I887 | Peroxiredoxin-1. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.865 |
Prdx1 | Txn2 | G3GYP9 | G3IMT0 | Peroxiredoxin-1. | Thioredoxin, mitochondrial. | 0.853 |
Prdx2 | Prdx1 | G3HCW9 | G3GYP9 | Peroxiredoxin-2. | Peroxiredoxin-1. | 0.516 |
Prdx2 | Prdx5 | G3HCW9 | G3I887 | Peroxiredoxin-2. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.909 |
Prdx2 | Txn2 | G3HCW9 | G3IMT0 | Peroxiredoxin-2. | Thioredoxin, mitochondrial. | 0.797 |
Prdx3 | Prdx5 | G3H7R4 | G3I887 | Thioredoxin-dependent peroxide reductase, mitochondrial. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.913 |
Prdx3 | Txn2 | G3H7R4 | G3IMT0 | Thioredoxin-dependent peroxide reductase, mitochondrial. | Thioredoxin, mitochondrial. | 0.926 |
page 1 of 3