STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_025500Voltage-dependent L-type calcium channel subunit alpha-1S. (87 aa)    
Predicted Functional Partners:
Unc79
Protein unc-79-like.
   
 0.981
H671_1g1127
Voltage-dependent calcium channel subunit alpha-2/delta-1.
   
 0.874
I79_005713
Voltage-dependent L-type calcium channel subunit beta-1.
   
 0.846
Cacng1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 
 0.811
Cacnb3
Voltage-dependent L-type calcium channel subunit beta-3.
   
 0.694
Stac2
SH3 and cysteine-rich domain-containing protein 2.
    
 
 0.641
Arl5a
Voltage-dependent L-type calcium channel subunit beta-4.
   
 0.640
I79_008579
WD repeat-containing protein 35.
    
 0.591
I79_001462
Voltage-dependent calcium channel subunit alpha-2/delta-3.
   
 0.583
Jph1
Junctophilin-1.
   
 
 0.579
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.