STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_026035Tudor domain-containing protein PHF20L1. (121 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia group M protein-like.
    
 0.711
I79_022999
Fanconi anemia group M protein-like.
    
 0.711
I79_000164
Zinc finger protein 280D.
   
 0.522
Gatad2b
Transcriptional repressor p66-beta.
    
 
 0.504
Bclaf3
Uncharacterized protein CXorf23-like.
  
     0.487
Gatad2a
Transcriptional repressor p66 alpha.
    
 
 0.485
Chd3
Chromodomain-helicase-DNA-binding protein 3.
    
 0.445
Hmg20a
High mobility group protein 20A.
    
 
 0.440
Lin54
Protein lin-54-like.
   
 0.440
Bcl11a
B-cell lymphoma/leukemia 11A.
    
  0.425
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.