Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE38136.1 | SFE38176.1 | SAMN04488541_10011 | SAMN04488541_10012 | Homeodomain-like domain-containing protein. | Hypothetical protein. | 0.417 |
SFE38136.1 | SFE89630.1 | SAMN04488541_10011 | SAMN04488541_100976 | Homeodomain-like domain-containing protein. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.552 |
SFE38136.1 | SFF41831.1 | SAMN04488541_10011 | SAMN04488541_103253 | Homeodomain-like domain-containing protein. | GDSL-like Lipase/Acylhydrolase family protein. | 0.580 |
SFE38136.1 | SFF54886.1 | SAMN04488541_10011 | SAMN04488541_10548 | Homeodomain-like domain-containing protein. | D-amino-acid dehydrogenase. | 0.771 |
SFE38176.1 | SFE38136.1 | SAMN04488541_10012 | SAMN04488541_10011 | Hypothetical protein. | Homeodomain-like domain-containing protein. | 0.417 |
SFE89630.1 | SFE38136.1 | SAMN04488541_100976 | SAMN04488541_10011 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | Homeodomain-like domain-containing protein. | 0.552 |
SFE89630.1 | SFF41831.1 | SAMN04488541_100976 | SAMN04488541_103253 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | GDSL-like Lipase/Acylhydrolase family protein. | 0.842 |
SFF41831.1 | SFE38136.1 | SAMN04488541_103253 | SAMN04488541_10011 | GDSL-like Lipase/Acylhydrolase family protein. | Homeodomain-like domain-containing protein. | 0.580 |
SFF41831.1 | SFE89630.1 | SAMN04488541_103253 | SAMN04488541_100976 | GDSL-like Lipase/Acylhydrolase family protein. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.842 |
SFF54886.1 | SFE38136.1 | SAMN04488541_10548 | SAMN04488541_10011 | D-amino-acid dehydrogenase. | Homeodomain-like domain-containing protein. | 0.771 |