Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE38530.1 | SFE81741.1 | SAMN04488541_100114 | SAMN04488541_100784 | LysM domain-containing protein. | Penicillin-binding protein 2. | 0.666 |
SFE38530.1 | SFE85124.1 | SAMN04488541_100114 | SAMN04488541_100856 | LysM domain-containing protein. | OmpA family protein. | 0.572 |
SFE38530.1 | SFE91967.1 | SAMN04488541_100114 | SAMN04488541_101010 | LysM domain-containing protein. | Transglycosylase SLT domain-containing protein. | 0.546 |
SFE38530.1 | SFF19285.1 | SAMN04488541_100114 | SAMN04488541_101974 | LysM domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.562 |
SFE38530.1 | SFF29576.1 | SAMN04488541_100114 | SAMN04488541_102431 | LysM domain-containing protein. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.725 |
SFE38530.1 | SFF33056.1 | SAMN04488541_100114 | SAMN04488541_102635 | LysM domain-containing protein. | Penicillin-binding protein 1A. | 0.563 |
SFE38530.1 | SFF46978.1 | SAMN04488541_100114 | SAMN04488541_103829 | LysM domain-containing protein. | Peptidoglycan-associated lipoprotein. | 0.570 |
SFE38530.1 | SFF52251.1 | SAMN04488541_100114 | SAMN04488541_104719 | LysM domain-containing protein. | Transglycosylase SLT domain-containing protein. | 0.566 |
SFE38530.1 | guaA | SAMN04488541_100114 | SAMN04488541_100380 | LysM domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.731 |
SFE38530.1 | guaB | SAMN04488541_100114 | SAMN04488541_10344 | LysM domain-containing protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.719 |
SFE81741.1 | SFE38530.1 | SAMN04488541_100784 | SAMN04488541_100114 | Penicillin-binding protein 2. | LysM domain-containing protein. | 0.666 |
SFE81741.1 | SFE91967.1 | SAMN04488541_100784 | SAMN04488541_101010 | Penicillin-binding protein 2. | Transglycosylase SLT domain-containing protein. | 0.484 |
SFE81741.1 | SFF33056.1 | SAMN04488541_100784 | SAMN04488541_102635 | Penicillin-binding protein 2. | Penicillin-binding protein 1A. | 0.858 |
SFE81741.1 | SFF52251.1 | SAMN04488541_100784 | SAMN04488541_104719 | Penicillin-binding protein 2. | Transglycosylase SLT domain-containing protein. | 0.424 |
SFE85124.1 | SFE38530.1 | SAMN04488541_100856 | SAMN04488541_100114 | OmpA family protein. | LysM domain-containing protein. | 0.572 |
SFE85124.1 | SFF29576.1 | SAMN04488541_100856 | SAMN04488541_102431 | OmpA family protein. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.721 |
SFE85124.1 | SFF46978.1 | SAMN04488541_100856 | SAMN04488541_103829 | OmpA family protein. | Peptidoglycan-associated lipoprotein. | 0.918 |
SFE85124.1 | guaA | SAMN04488541_100856 | SAMN04488541_100380 | OmpA family protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.742 |
SFE85124.1 | guaB | SAMN04488541_100856 | SAMN04488541_10344 | OmpA family protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.738 |
SFE91967.1 | SFE38530.1 | SAMN04488541_101010 | SAMN04488541_100114 | Transglycosylase SLT domain-containing protein. | LysM domain-containing protein. | 0.546 |
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