STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE38203.1GWxTD domain-containing protein. (402 aa)    
Predicted Functional Partners:
SFE38236.1
Iron complex transport system ATP-binding protein.
       0.752
SFF26269.1
Hypothetical protein.
  
     0.705
SFF57296.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.684
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.679
SFE48630.1
Hypothetical protein.
  
     0.676
SFE99455.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.667
SFE39551.1
Hypothetical protein.
  
     0.603
SFE57208.1
Hypothetical protein.
  
     0.587
SFE38176.1
Hypothetical protein.
       0.586
SFF51703.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.582
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.