STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE49358.1Protein of unknown function. (147 aa)    
Predicted Functional Partners:
SFE49384.1
Hydrogenase expression/formation protein HypE.
       0.693
SFE49410.1
Hydrogenase expression/formation protein HypD.
       0.657
SFE49332.1
Protein of unknown function.
       0.628
SFE49313.1
Hypothetical protein.
       0.464
SFE49443.1
Hydrogenase expression/formation protein HypC.
       0.452
SFE49478.1
Hydrogenase maturation protein, carbamoyltransferase HypF.
       0.444
SFE49506.1
Hydrogenase nickel incorporation protein HypB.
       0.444
SFE80575.1
NIPSNAP protein.
  
     0.440
SFE49544.1
Hypothetical protein.
       0.426
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.426
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.