STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE49544.1Hypothetical protein. (281 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.773
SFE49598.1
Hypothetical protein.
       0.752
SFE49632.1
Hypothetical protein.
       0.752
SFE49478.1
Hydrogenase maturation protein, carbamoyltransferase HypF.
       0.737
SFE49506.1
Hydrogenase nickel incorporation protein HypB.
       0.737
SFE49443.1
Hydrogenase expression/formation protein HypC.
       0.721
SFE49661.1
Hypothetical protein.
       0.703
SFE49695.1
Hydrogenase maturation protease.
       0.666
SFE49721.1
Hydrogenase large subunit.
 
     0.542
SFE49410.1
Hydrogenase expression/formation protein HypD.
       0.491
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.