Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE44472.1 | SFE56918.1 | SAMN04488541_1001212 | SAMN04488541_100363 | Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily. | Transglutaminase-like enzyme, putative cysteine protease. | 0.411 |
SFE56892.1 | SFE56918.1 | SAMN04488541_100362 | SAMN04488541_100363 | Protein of unknown function. | Transglutaminase-like enzyme, putative cysteine protease. | 0.561 |
SFE56918.1 | SFE44472.1 | SAMN04488541_100363 | SAMN04488541_1001212 | Transglutaminase-like enzyme, putative cysteine protease. | Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily. | 0.411 |
SFE56918.1 | SFE56892.1 | SAMN04488541_100363 | SAMN04488541_100362 | Transglutaminase-like enzyme, putative cysteine protease. | Protein of unknown function. | 0.561 |
SFE56918.1 | SFE96613.1 | SAMN04488541_100363 | SAMN04488541_101154 | Transglutaminase-like enzyme, putative cysteine protease. | Conserved hypothetical protein, HNE_0200 family. | 0.404 |
SFE56918.1 | SFE99279.1 | SAMN04488541_100363 | SAMN04488541_101240 | Transglutaminase-like enzyme, putative cysteine protease. | Por secretion system C-terminal sorting domain-containing protein. | 0.406 |
SFE56918.1 | SFF14067.1 | SAMN04488541_100363 | SAMN04488541_101749 | Transglutaminase-like enzyme, putative cysteine protease. | Exosortase family protein XrtF. | 0.404 |
SFE96613.1 | SFE56918.1 | SAMN04488541_101154 | SAMN04488541_100363 | Conserved hypothetical protein, HNE_0200 family. | Transglutaminase-like enzyme, putative cysteine protease. | 0.404 |
SFE99279.1 | SFE56918.1 | SAMN04488541_101240 | SAMN04488541_100363 | Por secretion system C-terminal sorting domain-containing protein. | Transglutaminase-like enzyme, putative cysteine protease. | 0.406 |
SFE99279.1 | SFF14067.1 | SAMN04488541_101240 | SAMN04488541_101749 | Por secretion system C-terminal sorting domain-containing protein. | Exosortase family protein XrtF. | 0.603 |
SFF14067.1 | SFE56918.1 | SAMN04488541_101749 | SAMN04488541_100363 | Exosortase family protein XrtF. | Transglutaminase-like enzyme, putative cysteine protease. | 0.404 |
SFF14067.1 | SFE99279.1 | SAMN04488541_101749 | SAMN04488541_101240 | Exosortase family protein XrtF. | Por secretion system C-terminal sorting domain-containing protein. | 0.603 |