Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE70751.1 | SFE70781.1 | SAMN04488541_1005118 | SAMN04488541_1005119 | FAD dependent oxidoreductase. | Hypothetical protein. | 0.415 |
SFE70781.1 | SFE70751.1 | SAMN04488541_1005119 | SAMN04488541_1005118 | Hypothetical protein. | FAD dependent oxidoreductase. | 0.415 |
SFE70781.1 | SFE93020.1 | SAMN04488541_1005119 | SAMN04488541_101055 | Hypothetical protein. | Uncharacterized conserved protein, DUF2126 family. | 0.744 |
SFE70781.1 | SFF36235.1 | SAMN04488541_1005119 | SAMN04488541_102834 | Hypothetical protein. | Endonuclease, Uma2 family (restriction endonuclease fold). | 0.406 |
SFE70781.1 | SFF49148.1 | SAMN04488541_1005119 | SAMN04488541_104133 | Hypothetical protein. | NADP oxidoreductase coenzyme F420-dependent. | 0.428 |
SFE93020.1 | SFE70781.1 | SAMN04488541_101055 | SAMN04488541_1005119 | Uncharacterized conserved protein, DUF2126 family. | Hypothetical protein. | 0.744 |
SFF36235.1 | SFE70781.1 | SAMN04488541_102834 | SAMN04488541_1005119 | Endonuclease, Uma2 family (restriction endonuclease fold). | Hypothetical protein. | 0.406 |
SFF49148.1 | SFE70781.1 | SAMN04488541_104133 | SAMN04488541_1005119 | NADP oxidoreductase coenzyme F420-dependent. | Hypothetical protein. | 0.428 |