STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE71274.1Predicted dehydrogenase. (373 aa)    
Predicted Functional Partners:
SFE71301.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
    0.884
SFE71241.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
     0.868
SFE76854.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.697
SFF12080.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.616
SFF38171.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.592
SFE81622.1
Predicted dehydrogenase.
  
     0.559
SFE76105.1
Sugar phosphate isomerase/epimerase.
  
    0.556
SFF08627.1
Repeat domain-containing protein.
  
     0.540
SFF37721.1
Predicted dehydrogenase.
  
     0.537
SFF41228.1
Predicted dehydrogenase.
  
     0.524
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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