Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE50686.1 | SFE76854.1 | SAMN04488541_1002121 | SAMN04488541_1006115 | Repeat domain-containing protein. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.605 |
SFE50686.1 | SFE93889.1 | SAMN04488541_1002121 | SAMN04488541_101090 | Repeat domain-containing protein. | PA14 domain-containing protein. | 0.467 |
SFE50686.1 | SFF29443.1 | SAMN04488541_1002121 | SAMN04488541_102423 | Repeat domain-containing protein. | Cytochrome c. | 0.809 |
SFE50686.1 | SFF47755.1 | SAMN04488541_1002121 | SAMN04488541_103926 | Repeat domain-containing protein. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.500 |
SFE51818.1 | SFE71274.1 | SAMN04488541_1002156 | SAMN04488541_1005135 | 2-dehydro-3-deoxy-D-arabinonate dehydratase. | Predicted dehydrogenase. | 0.415 |
SFE51818.1 | SFE76854.1 | SAMN04488541_1002156 | SAMN04488541_1006115 | 2-dehydro-3-deoxy-D-arabinonate dehydratase. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.656 |
SFE51818.1 | SFE80575.1 | SAMN04488541_1002156 | SAMN04488541_100742 | 2-dehydro-3-deoxy-D-arabinonate dehydratase. | NIPSNAP protein. | 0.404 |
SFE71274.1 | SFE51818.1 | SAMN04488541_1005135 | SAMN04488541_1002156 | Predicted dehydrogenase. | 2-dehydro-3-deoxy-D-arabinonate dehydratase. | 0.415 |
SFE71274.1 | SFE76854.1 | SAMN04488541_1005135 | SAMN04488541_1006115 | Predicted dehydrogenase. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.697 |
SFE71274.1 | SFE80575.1 | SAMN04488541_1005135 | SAMN04488541_100742 | Predicted dehydrogenase. | NIPSNAP protein. | 0.523 |
SFE71274.1 | SFF47755.1 | SAMN04488541_1005135 | SAMN04488541_103926 | Predicted dehydrogenase. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.509 |
SFE76854.1 | SFE50686.1 | SAMN04488541_1006115 | SAMN04488541_1002121 | Putative membrane-bound dehydrogenase domain-containing protein. | Repeat domain-containing protein. | 0.605 |
SFE76854.1 | SFE51818.1 | SAMN04488541_1006115 | SAMN04488541_1002156 | Putative membrane-bound dehydrogenase domain-containing protein. | 2-dehydro-3-deoxy-D-arabinonate dehydratase. | 0.656 |
SFE76854.1 | SFE71274.1 | SAMN04488541_1006115 | SAMN04488541_1005135 | Putative membrane-bound dehydrogenase domain-containing protein. | Predicted dehydrogenase. | 0.697 |
SFE76854.1 | SFE80575.1 | SAMN04488541_1006115 | SAMN04488541_100742 | Putative membrane-bound dehydrogenase domain-containing protein. | NIPSNAP protein. | 0.693 |
SFE76854.1 | SFE93889.1 | SAMN04488541_1006115 | SAMN04488541_101090 | Putative membrane-bound dehydrogenase domain-containing protein. | PA14 domain-containing protein. | 0.651 |
SFE76854.1 | SFF06015.1 | SAMN04488541_1006115 | SAMN04488541_101459 | Putative membrane-bound dehydrogenase domain-containing protein. | Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. | 0.610 |
SFE76854.1 | SFF26044.1 | SAMN04488541_1006115 | SAMN04488541_102253 | Putative membrane-bound dehydrogenase domain-containing protein. | Methane oxygenase PmoA. | 0.611 |
SFE76854.1 | SFF29443.1 | SAMN04488541_1006115 | SAMN04488541_102423 | Putative membrane-bound dehydrogenase domain-containing protein. | Cytochrome c. | 0.735 |
SFE76854.1 | SFF35132.1 | SAMN04488541_1006115 | SAMN04488541_102770 | Putative membrane-bound dehydrogenase domain-containing protein. | 2-oxoisovalerate dehydrogenase E1 component. | 0.610 |
page 1 of 3