Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE56943.1 | SFE75444.1 | SAMN04488541_100364 | SAMN04488541_100663 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.988 |
SFE56943.1 | SFE79509.1 | SAMN04488541_100364 | SAMN04488541_10077 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Chorismate mutase. | 0.865 |
SFE56943.1 | SFF38913.1 | SAMN04488541_100364 | SAMN04488541_103014 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Shikimate dehydrogenase. | 0.934 |
SFE56943.1 | aroA | SAMN04488541_100364 | SAMN04488541_100718 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.988 |
SFE56943.1 | aroK | SAMN04488541_100364 | SAMN04488541_101420 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.987 |
SFE56943.1 | aroQ | SAMN04488541_100364 | SAMN04488541_1006126 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.915 |
SFE75444.1 | SFE56943.1 | SAMN04488541_100663 | SAMN04488541_100364 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.988 |
SFE75444.1 | SFE79509.1 | SAMN04488541_100663 | SAMN04488541_10077 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Chorismate mutase. | 0.988 |
SFE75444.1 | SFE89207.1 | SAMN04488541_100663 | SAMN04488541_100957 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Isochorismate synthase. | 0.834 |
SFE75444.1 | SFF10909.1 | SAMN04488541_100663 | SAMN04488541_101623 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate synthase. | 0.976 |
SFE75444.1 | SFF38913.1 | SAMN04488541_100663 | SAMN04488541_103014 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate dehydrogenase. | 0.939 |
SFE75444.1 | aroA | SAMN04488541_100663 | SAMN04488541_100718 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.995 |
SFE75444.1 | aroK | SAMN04488541_100663 | SAMN04488541_101420 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.942 |
SFE75444.1 | aroQ | SAMN04488541_100663 | SAMN04488541_1006126 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.710 |
SFE79509.1 | SFE56943.1 | SAMN04488541_10077 | SAMN04488541_100364 | Chorismate mutase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.865 |
SFE79509.1 | SFE75444.1 | SAMN04488541_10077 | SAMN04488541_100663 | Chorismate mutase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.988 |
SFE79509.1 | SFE89207.1 | SAMN04488541_10077 | SAMN04488541_100957 | Chorismate mutase. | Isochorismate synthase. | 0.852 |
SFE79509.1 | SFF10909.1 | SAMN04488541_10077 | SAMN04488541_101623 | Chorismate mutase. | 3-dehydroquinate synthase. | 0.846 |
SFE79509.1 | SFF38913.1 | SAMN04488541_10077 | SAMN04488541_103014 | Chorismate mutase. | Shikimate dehydrogenase. | 0.860 |
SFE79509.1 | aroA | SAMN04488541_10077 | SAMN04488541_100718 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.953 |
page 1 of 4