Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE57664.1 | SFE77280.1 | SAMN04488541_100391 | SAMN04488541_1006130 | Glycosyltransferase Family 4. | Glycosyltransferase like family 2. | 0.743 |
SFE57664.1 | SFF18239.1 | SAMN04488541_100391 | SAMN04488541_101920 | Glycosyltransferase Family 4. | Glycosyltransferase involved in cell wall bisynthesis. | 0.411 |
SFE57664.1 | SFF38303.1 | SAMN04488541_100391 | SAMN04488541_102954 | Glycosyltransferase Family 4. | TPR repeat-containing protein. | 0.410 |
SFE57664.1 | SFF41831.1 | SAMN04488541_100391 | SAMN04488541_103253 | Glycosyltransferase Family 4. | GDSL-like Lipase/Acylhydrolase family protein. | 0.448 |
SFE57664.1 | SFF61188.1 | SAMN04488541_100391 | SAMN04488541_10821 | Glycosyltransferase Family 4. | TPR repeat-containing protein. | 0.410 |
SFE77280.1 | SFE57664.1 | SAMN04488541_1006130 | SAMN04488541_100391 | Glycosyltransferase like family 2. | Glycosyltransferase Family 4. | 0.743 |
SFE77280.1 | SFE77310.1 | SAMN04488541_1006130 | SAMN04488541_1006131 | Glycosyltransferase like family 2. | Protein of unknown function (DU1801). | 0.773 |
SFE77280.1 | SFF02003.1 | SAMN04488541_1006130 | SAMN04488541_101317 | Glycosyltransferase like family 2. | Tetratricopeptide repeat-containing protein. | 0.540 |
SFE77280.1 | SFF05353.1 | SAMN04488541_1006130 | SAMN04488541_101432 | Glycosyltransferase like family 2. | O-Glycosyl hydrolase. | 0.679 |
SFE77280.1 | SFF18239.1 | SAMN04488541_1006130 | SAMN04488541_101920 | Glycosyltransferase like family 2. | Glycosyltransferase involved in cell wall bisynthesis. | 0.582 |
SFE77280.1 | SFF29443.1 | SAMN04488541_1006130 | SAMN04488541_102423 | Glycosyltransferase like family 2. | Cytochrome c. | 0.595 |
SFE77280.1 | SFF38303.1 | SAMN04488541_1006130 | SAMN04488541_102954 | Glycosyltransferase like family 2. | TPR repeat-containing protein. | 0.544 |
SFE77280.1 | SFF39386.1 | SAMN04488541_1006130 | SAMN04488541_103045 | Glycosyltransferase like family 2. | Tetratricopeptide repeat-containing protein. | 0.554 |
SFE77280.1 | SFF41831.1 | SAMN04488541_1006130 | SAMN04488541_103253 | Glycosyltransferase like family 2. | GDSL-like Lipase/Acylhydrolase family protein. | 0.673 |
SFE77280.1 | SFF61188.1 | SAMN04488541_1006130 | SAMN04488541_10821 | Glycosyltransferase like family 2. | TPR repeat-containing protein. | 0.547 |
SFE77310.1 | SFE77280.1 | SAMN04488541_1006131 | SAMN04488541_1006130 | Protein of unknown function (DU1801). | Glycosyltransferase like family 2. | 0.773 |
SFF02003.1 | SFE77280.1 | SAMN04488541_101317 | SAMN04488541_1006130 | Tetratricopeptide repeat-containing protein. | Glycosyltransferase like family 2. | 0.540 |
SFF02003.1 | SFF38303.1 | SAMN04488541_101317 | SAMN04488541_102954 | Tetratricopeptide repeat-containing protein. | TPR repeat-containing protein. | 0.523 |
SFF02003.1 | SFF61188.1 | SAMN04488541_101317 | SAMN04488541_10821 | Tetratricopeptide repeat-containing protein. | TPR repeat-containing protein. | 0.518 |
SFF05353.1 | SFE77280.1 | SAMN04488541_101432 | SAMN04488541_1006130 | O-Glycosyl hydrolase. | Glycosyltransferase like family 2. | 0.679 |
page 1 of 3