STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE79671.1Gliding-associated putative ABC transporter substrate-binding component GldG. (561 aa)    
Predicted Functional Partners:
SFE81402.1
ABC-2 type transport system permease protein.
  
 0.982
SFF52947.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.805
SFF51851.1
ABC-2 type transport system ATP-binding protein.
 
   
 0.799
SFF27314.1
Gliding motility-associated lipoprotein GldB.
  
   
 0.784
SFF23841.1
Gliding motility-associated protein GldL.
  
   
 0.778
SFF55261.1
Gliding motility-associated lipoprotein GldJ/gliding motility-associated lipoprotein GldJ,TIGR03530.
  
   
 0.772
SFE77636.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.742
SFE42341.1
Hypothetical protein.
  
     0.741
SFF29560.1
Protein of unknown function.
  
     0.735
SFF21564.1
WD40-like Beta Propeller Repeat.
  
     0.718
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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