STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE80130.1Uncharacterized conserved protein, DUF433 family. (87 aa)    
Predicted Functional Partners:
SFE80100.1
Hypothetical protein.
 
     0.950
SFF33375.1
Predicted nuclease, contains PIN domain, potential toxin-antitoxin system component.
  
     0.662
SFE76377.1
Predicted nuclease, contains PIN domain, potential toxin-antitoxin system component.
  
     0.638
SFF61524.1
Uncharacterized conserved protein, DUF433 family.
  
     0.629
SFE76402.1
Uncharacterized conserved protein, DUF433 family.
  
     0.612
SFF33387.1
Uncharacterized conserved protein, DUF433 family.
  
     0.582
SFE74769.1
Uncharacterized conserved protein, DUF433 family.
  
     0.537
SFE65155.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.513
SFE80164.1
Ribosomal protein S18 acetylase RimI.
       0.504
SFE41882.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.498
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.