STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE81318.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
SFF55453.1
Hypothetical protein.
  
     0.646
SFE81291.1
Dipeptidyl-peptidase-4.
 
     0.641
SFE43376.1
YcxB-like protein.
  
     0.625
SFE57360.1
Hypothetical protein.
  
     0.611
SFE91877.1
Hypothetical protein.
  
     0.580
SFF30176.1
Hypothetical protein.
  
     0.578
SFF33336.1
Cell division protein FtsI (penicillin-binding protein 3).
 
     0.567
SFF24069.1
Hypothetical protein.
  
     0.554
SFF18418.1
Lipopolysaccharide-assembly.
 
     0.537
SFE59247.1
Family of unknown function.
  
     0.526
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.