Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE70426.1 | SFE70454.1 | SAMN04488541_1005108 | SAMN04488541_1005109 | Hypothetical protein. | Protein of unknown function. | 0.966 |
SFE70426.1 | SFE84363.1 | SAMN04488541_1005108 | SAMN04488541_100823 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.785 |
SFE70454.1 | SFE70426.1 | SAMN04488541_1005109 | SAMN04488541_1005108 | Protein of unknown function. | Hypothetical protein. | 0.966 |
SFE70454.1 | SFE84363.1 | SAMN04488541_1005109 | SAMN04488541_100823 | Protein of unknown function. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.780 |
SFE70454.1 | SFF12262.1 | SAMN04488541_1005109 | SAMN04488541_101689 | Protein of unknown function. | Hypothetical protein. | 0.891 |
SFE70454.1 | SFF32832.1 | SAMN04488541_1005109 | SAMN04488541_102620 | Protein of unknown function. | Hypothetical protein. | 0.891 |
SFE74532.1 | SFE75076.1 | SAMN04488541_100626 | SAMN04488541_100649 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFE74532.1 | SFE84363.1 | SAMN04488541_100626 | SAMN04488541_100823 | PAS domain S-box-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.889 |
SFE74532.1 | SFE96632.1 | SAMN04488541_100626 | SAMN04488541_101155 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFE74532.1 | SFF13190.1 | SAMN04488541_100626 | SAMN04488541_10172 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SFE74532.1 | SFF32514.1 | SAMN04488541_100626 | SAMN04488541_10262 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFE74532.1 | SFF43644.1 | SAMN04488541_100626 | SAMN04488541_103418 | PAS domain S-box-containing protein. | Protein of unknown function. | 0.999 |
SFE75076.1 | SFE74532.1 | SAMN04488541_100649 | SAMN04488541_100626 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFE75076.1 | SFE84363.1 | SAMN04488541_100649 | SAMN04488541_100823 | PAS domain S-box-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.856 |
SFE75076.1 | SFE96632.1 | SAMN04488541_100649 | SAMN04488541_101155 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFE75076.1 | SFF13190.1 | SAMN04488541_100649 | SAMN04488541_10172 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SFE75076.1 | SFF32514.1 | SAMN04488541_100649 | SAMN04488541_10262 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFE75076.1 | SFF43644.1 | SAMN04488541_100649 | SAMN04488541_103418 | PAS domain S-box-containing protein. | Protein of unknown function. | 0.999 |
SFE84363.1 | SFE70426.1 | SAMN04488541_100823 | SAMN04488541_1005108 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.785 |
SFE84363.1 | SFE70454.1 | SAMN04488541_100823 | SAMN04488541_1005109 | Serine phosphatase RsbU, regulator of sigma subunit. | Protein of unknown function. | 0.780 |
page 1 of 3