STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE90446.1Glutamate synthase (NADH) large subunit. (1528 aa)    
Predicted Functional Partners:
SFE41170.1
Glutamate dehydrogenase/leucine dehydrogenase.
  
 0.999
SFE90469.1
Glutamate synthase (NADH) small subunit.
 0.999
SFE89478.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.999
SFF43879.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.999
SFE76827.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
0.994
SFE93694.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.941
SFF44049.1
D-lactate dehydrogenase.
   
 0.889
SFE44224.1
Transcriptional regulator, LacI family.
    
 
 0.875
SFE56732.1
Transcriptional regulator, LacI family.
    
 
 0.875
SFE80720.1
Transcriptional regulator, LacI family.
    
 
 0.875
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.