Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE69661.1 | SFF03193.1 | SAMN04488541_100580 | SAMN04488541_101369 | TonB family C-terminal domain-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.516 |
SFF03193.1 | SFE69661.1 | SAMN04488541_101369 | SAMN04488541_100580 | TonB-linked outer membrane protein, SusC/RagA family. | TonB family C-terminal domain-containing protein. | 0.516 |
SFF03193.1 | SFF03214.1 | SAMN04488541_101369 | SAMN04488541_101370 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.946 |
SFF03193.1 | SFF03265.1 | SAMN04488541_101369 | SAMN04488541_101372 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.827 |
SFF03193.1 | SFF06128.1 | SAMN04488541_101369 | SAMN04488541_101464 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.768 |
SFF03193.1 | SFF06173.1 | SAMN04488541_101369 | SAMN04488541_101466 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.738 |
SFF03193.1 | SFF11144.1 | SAMN04488541_101369 | SAMN04488541_101636 | TonB-linked outer membrane protein, SusC/RagA family. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.584 |
SFF03193.1 | SFF24359.1 | SAMN04488541_101369 | SAMN04488541_102188 | TonB-linked outer membrane protein, SusC/RagA family. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.538 |
SFF03193.1 | SFF46009.1 | SAMN04488541_101369 | SAMN04488541_103711 | TonB-linked outer membrane protein, SusC/RagA family. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.503 |
SFF03193.1 | SFF48385.1 | SAMN04488541_101369 | SAMN04488541_104030 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.620 |
SFF03193.1 | SFF54625.1 | SAMN04488541_101369 | SAMN04488541_105312 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.754 |
SFF03214.1 | SFF03193.1 | SAMN04488541_101370 | SAMN04488541_101369 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.946 |
SFF03214.1 | SFF03265.1 | SAMN04488541_101370 | SAMN04488541_101372 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.446 |
SFF03265.1 | SFF03193.1 | SAMN04488541_101372 | SAMN04488541_101369 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.827 |
SFF03265.1 | SFF03214.1 | SAMN04488541_101372 | SAMN04488541_101370 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.446 |
SFF06128.1 | SFF03193.1 | SAMN04488541_101464 | SAMN04488541_101369 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.768 |
SFF06128.1 | SFF06173.1 | SAMN04488541_101464 | SAMN04488541_101466 | SusD family protein. | SusD family protein. | 0.553 |
SFF06173.1 | SFF03193.1 | SAMN04488541_101466 | SAMN04488541_101369 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.738 |
SFF06173.1 | SFF06128.1 | SAMN04488541_101466 | SAMN04488541_101464 | SusD family protein. | SusD family protein. | 0.553 |
SFF11144.1 | SFF03193.1 | SAMN04488541_101636 | SAMN04488541_101369 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB-linked outer membrane protein, SusC/RagA family. | 0.584 |
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