STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF03347.1Hypothetical protein. (429 aa)    
Predicted Functional Partners:
SFF41856.1
PLD-like domain-containing protein.
  
 0.917
SFF03369.1
Sulfatase-modifying factor enzyme 1.
 
    0.815
SFF03396.1
Sulfatase-modifying factor enzyme 1.
  
    0.756
SFF14422.1
TPR repeat-containing protein.
  
  0.750
SFF38086.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
  0.750
SFE44036.1
Allosteric NADP-dependent malic enzyme.
   
  0.738
SFE90446.1
Glutamate synthase (NADH) large subunit.
    
  0.728
SFE55874.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.719
SFE94338.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
  0.719
SFE67997.1
3-oxoacid CoA-transferase subunit B.
    
  0.710
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.