STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF05353.1O-Glycosyl hydrolase. (557 aa)    
Predicted Functional Partners:
SFF41831.1
GDSL-like Lipase/Acylhydrolase family protein.
 
  
 0.911
SFF55311.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.843
SFF29490.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.842
SFE52655.1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.822
SFE75125.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
 0.812
SFE85830.1
Putative collagen-binding domain of a collagenase.
 
  
 0.792
SFF43504.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
  
 0.786
SFF46049.1
CubicO group peptidase, beta-lactamase class C family.
    
 0.785
SFF59188.1
CubicO group peptidase, beta-lactamase class C family.
    
 0.785
SFF23058.1
Vitamin K-dependent gamma-carboxylase.
  
 
 0.778
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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