STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF08284.1Peroxiredoxin. (608 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.775
SFF40556.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 0.643
SFF52976.1
AhpC/TSA family protein.
  
     0.601
SFE79470.1
Dihydrolipoamide dehydrogenase.
   
  0.535
SFF54871.1
Dihydrolipoamide dehydrogenase.
   
  0.535
SFE99691.1
Thiol:disulfide interchange protein DsbD.
  
   0.529
SFE90508.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.525
SFF53643.1
Protein SCO1/2.
  
   0.521
SFF20676.1
Protein SCO1/2.
  
   0.500
SFE70583.1
Zinc protease.
  
   0.465
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.