Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE55677.1 | SFF11696.1 | SAMN04488541_100320 | SAMN04488541_101661 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.568 |
SFF11584.1 | SFF11605.1 | SAMN04488541_101655 | SAMN04488541_101656 | Hemolysin III. | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | 0.568 |
SFF11584.1 | SFF11620.1 | SAMN04488541_101655 | SAMN04488541_101657 | Hemolysin III. | Hypothetical protein. | 0.568 |
SFF11584.1 | SFF11636.1 | SAMN04488541_101655 | SAMN04488541_101658 | Hemolysin III. | LPS export ABC transporter protein LptC. | 0.446 |
SFF11584.1 | SFF11657.1 | SAMN04488541_101655 | SAMN04488541_101659 | Hemolysin III. | Hypothetical protein. | 0.446 |
SFF11584.1 | SFF11677.1 | SAMN04488541_101655 | SAMN04488541_101660 | Hemolysin III. | Hemolysin, contains CBS domains. | 0.461 |
SFF11584.1 | SFF11696.1 | SAMN04488541_101655 | SAMN04488541_101661 | Hemolysin III. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.417 |
SFF11605.1 | SFF11584.1 | SAMN04488541_101656 | SAMN04488541_101655 | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | Hemolysin III. | 0.568 |
SFF11605.1 | SFF11620.1 | SAMN04488541_101656 | SAMN04488541_101657 | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | Hypothetical protein. | 0.778 |
SFF11605.1 | SFF11636.1 | SAMN04488541_101656 | SAMN04488541_101658 | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | LPS export ABC transporter protein LptC. | 0.594 |
SFF11605.1 | SFF11657.1 | SAMN04488541_101656 | SAMN04488541_101659 | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | Hypothetical protein. | 0.594 |
SFF11605.1 | SFF11677.1 | SAMN04488541_101656 | SAMN04488541_101660 | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | Hemolysin, contains CBS domains. | 0.542 |
SFF11605.1 | SFF11696.1 | SAMN04488541_101656 | SAMN04488541_101661 | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.542 |
SFF11620.1 | SFF11584.1 | SAMN04488541_101657 | SAMN04488541_101655 | Hypothetical protein. | Hemolysin III. | 0.568 |
SFF11620.1 | SFF11605.1 | SAMN04488541_101657 | SAMN04488541_101656 | Hypothetical protein. | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | 0.778 |
SFF11620.1 | SFF11636.1 | SAMN04488541_101657 | SAMN04488541_101658 | Hypothetical protein. | LPS export ABC transporter protein LptC. | 0.594 |
SFF11620.1 | SFF11657.1 | SAMN04488541_101657 | SAMN04488541_101659 | Hypothetical protein. | Hypothetical protein. | 0.594 |
SFF11620.1 | SFF11677.1 | SAMN04488541_101657 | SAMN04488541_101660 | Hypothetical protein. | Hemolysin, contains CBS domains. | 0.542 |
SFF11620.1 | SFF11696.1 | SAMN04488541_101657 | SAMN04488541_101661 | Hypothetical protein. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.542 |
SFF11636.1 | SFF11584.1 | SAMN04488541_101658 | SAMN04488541_101655 | LPS export ABC transporter protein LptC. | Hemolysin III. | 0.446 |
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