STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF11960.1Protein of unknown function. (93 aa)    
Predicted Functional Partners:
SFF30031.1
Hypothetical protein.
  
     0.771
SFE43376.1
YcxB-like protein.
  
     0.747
SFE68803.1
Hypothetical protein.
  
     0.746
SFE68643.1
Putative porin.
  
     0.745
SFE39802.1
Hypothetical protein.
  
     0.724
SFF52465.1
Hypothetical protein.
  
     0.711
SFE59247.1
Family of unknown function.
  
     0.704
SFF49603.1
Hypothetical protein.
  
     0.692
SFF29080.1
Protein of unknown function.
  
     0.687
SFE39551.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.