STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF13644.1Por secretion system C-terminal sorting domain-containing protein. (133 aa)    
Predicted Functional Partners:
SFF13664.1
Hypothetical protein.
       0.741
SFE76675.1
Hypothetical protein.
  
     0.616
SFE48630.1
Hypothetical protein.
  
     0.615
SFF26269.1
Hypothetical protein.
  
     0.609
SFE70276.1
Hypothetical protein.
  
     0.595
SFF52465.1
Hypothetical protein.
  
     0.575
SFE83907.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.521
SFE64641.1
Protein of unknown function.
  
     0.519
SFE49017.1
Secretory lipase.
  
     0.516
SFE38203.1
GWxTD domain-containing protein.
  
     0.495
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.