STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF14119.1Predicted ATPase. (464 aa)    
Predicted Functional Partners:
SFF14100.1
Protein of unknown function.
       0.787
SFE88199.1
GldM C-terminal domain-containing protein.
  
     0.592
SFE69203.1
Serine/threonine protein phosphatase PrpC.
  
     0.591
SFE69175.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
  
     0.539
SFF14146.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
       0.513
SFE65155.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.511
SFE88174.1
Uncharacterized conserved protein, DUF697 family.
  
     0.499
SFE41882.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.495
SFF52543.1
Hypothetical protein.
  
     0.494
SFE76319.1
Hypothetical protein.
  
     0.479
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.