Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE57360.1 | SFF11144.1 | SAMN04488541_100379 | SAMN04488541_101636 | Hypothetical protein. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.747 |
SFE57360.1 | SFF15981.1 | SAMN04488541_100379 | SAMN04488541_101825 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.733 |
SFE57360.1 | SFF16013.1 | SAMN04488541_100379 | SAMN04488541_101827 | Hypothetical protein. | Biopolymer transport protein ExbD. | 0.766 |
SFE57360.1 | SFF16030.1 | SAMN04488541_100379 | SAMN04488541_101828 | Hypothetical protein. | Biopolymer transport protein ExbD/TolR. | 0.774 |
SFE57360.1 | SFF23649.1 | SAMN04488541_100379 | SAMN04488541_102148 | Hypothetical protein. | Hypothetical protein. | 0.758 |
SFE57360.1 | SFF24069.1 | SAMN04488541_100379 | SAMN04488541_102171 | Hypothetical protein. | Hypothetical protein. | 0.775 |
SFE57360.1 | SFF24359.1 | SAMN04488541_100379 | SAMN04488541_102188 | Hypothetical protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.760 |
SFE57360.1 | SFF34622.1 | SAMN04488541_100379 | SAMN04488541_102739 | Hypothetical protein. | Protein of unknown function. | 0.792 |
SFE69661.1 | SFF15981.1 | SAMN04488541_100580 | SAMN04488541_101825 | TonB family C-terminal domain-containing protein. | Biopolymer transport protein ExbB. | 0.700 |
SFE69661.1 | SFF16013.1 | SAMN04488541_100580 | SAMN04488541_101827 | TonB family C-terminal domain-containing protein. | Biopolymer transport protein ExbD. | 0.697 |
SFE69661.1 | SFF16030.1 | SAMN04488541_100580 | SAMN04488541_101828 | TonB family C-terminal domain-containing protein. | Biopolymer transport protein ExbD/TolR. | 0.748 |
SFE69661.1 | SFF34622.1 | SAMN04488541_100580 | SAMN04488541_102739 | TonB family C-terminal domain-containing protein. | Protein of unknown function. | 0.457 |
SFF11144.1 | SFE57360.1 | SAMN04488541_101636 | SAMN04488541_100379 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.747 |
SFF11144.1 | SFF15981.1 | SAMN04488541_101636 | SAMN04488541_101825 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbB. | 0.856 |
SFF11144.1 | SFF16013.1 | SAMN04488541_101636 | SAMN04488541_101827 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbD. | 0.881 |
SFF11144.1 | SFF16030.1 | SAMN04488541_101636 | SAMN04488541_101828 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbD/TolR. | 0.905 |
SFF11144.1 | SFF24069.1 | SAMN04488541_101636 | SAMN04488541_102171 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.703 |
SFF11144.1 | SFF34622.1 | SAMN04488541_101636 | SAMN04488541_102739 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Protein of unknown function. | 0.768 |
SFF15981.1 | SFE57360.1 | SAMN04488541_101825 | SAMN04488541_100379 | Biopolymer transport protein ExbB. | Hypothetical protein. | 0.733 |
SFF15981.1 | SFE69661.1 | SAMN04488541_101825 | SAMN04488541_100580 | Biopolymer transport protein ExbB. | TonB family C-terminal domain-containing protein. | 0.700 |
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