STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF18239.1Glycosyltransferase involved in cell wall bisynthesis. (313 aa)    
Predicted Functional Partners:
SFF18105.1
Glucose-1-phosphate cytidylyltransferase.
  
 0.950
SFF18087.1
Lipopolysaccharide transport system ATP-binding protein.
 
 
 0.896
SFF18138.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.883
SFE86312.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.882
SFF18177.1
dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+).
 
 
  0.870
SFF18122.1
CDP-glucose 4,6-dehydratase.
  
 
  0.852
SFF18156.1
Methyltransferase domain-containing protein.
 
     0.829
SFF18191.1
C-methyltransferase C-terminal domain-containing protein.
 
     0.828
SFF34801.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.809
SFF27092.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.785
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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