Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE76346.1 | SFF20542.1 | SAMN04488541_100696 | SAMN04488541_102011 | Acetolactate synthase, large subunit. | dTDP-glucose pyrophosphorylase. | 0.597 |
SFF04825.1 | SFF20542.1 | SAMN04488541_10148 | SAMN04488541_102011 | Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist. | dTDP-glucose pyrophosphorylase. | 0.974 |
SFF20542.1 | SFE76346.1 | SAMN04488541_102011 | SAMN04488541_100696 | dTDP-glucose pyrophosphorylase. | Acetolactate synthase, large subunit. | 0.597 |
SFF20542.1 | SFF04825.1 | SAMN04488541_102011 | SAMN04488541_10148 | dTDP-glucose pyrophosphorylase. | Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist. | 0.974 |
SFF20542.1 | tatC | SAMN04488541_102011 | SAMN04488541_102010 | dTDP-glucose pyrophosphorylase. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | 0.576 |
tatC | SFF20542.1 | SAMN04488541_102010 | SAMN04488541_102011 | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. | dTDP-glucose pyrophosphorylase. | 0.576 |