Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF23988.1 | SFF24007.1 | SAMN04488541_102166 | SAMN04488541_102167 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Ferritin; Iron-storage protein. | 0.484 |
SFF24007.1 | SFF23988.1 | SAMN04488541_102167 | SAMN04488541_102166 | Ferritin; Iron-storage protein. | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.484 |
SFF24007.1 | SFF40556.1 | SAMN04488541_102167 | SAMN04488541_103151 | Ferritin; Iron-storage protein. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.609 |
SFF24007.1 | SFF56103.1 | SAMN04488541_102167 | SAMN04488541_10588 | Ferritin; Iron-storage protein. | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | 0.629 |
SFF24007.1 | hemH | SAMN04488541_102167 | SAMN04488541_1001192 | Ferritin; Iron-storage protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.626 |
SFF24007.1 | rpsP | SAMN04488541_102167 | SAMN04488541_1003152 | Ferritin; Iron-storage protein. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.418 |
SFF40556.1 | SFF24007.1 | SAMN04488541_103151 | SAMN04488541_102167 | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | Ferritin; Iron-storage protein. | 0.609 |
SFF56103.1 | SFF24007.1 | SAMN04488541_10588 | SAMN04488541_102167 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Ferritin; Iron-storage protein. | 0.629 |
SFF56103.1 | hemH | SAMN04488541_10588 | SAMN04488541_1001192 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.659 |
hemH | SFF24007.1 | SAMN04488541_1001192 | SAMN04488541_102167 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Ferritin; Iron-storage protein. | 0.626 |
hemH | SFF56103.1 | SAMN04488541_1001192 | SAMN04488541_10588 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | 0.659 |
rpsP | SFF24007.1 | SAMN04488541_1003152 | SAMN04488541_102167 | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | Ferritin; Iron-storage protein. | 0.418 |