STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF24359.1Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (272 aa)    
Predicted Functional Partners:
SFF16030.1
Biopolymer transport protein ExbD/TolR.
  
   0.909
SFE50622.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
 0.903
SFF15981.1
Biopolymer transport protein ExbB.
 
 
 0.890
SFF16013.1
Biopolymer transport protein ExbD.
  
   0.882
SFE93529.1
BlaR1 peptidase M56.
 
  
  0.876
SFF05961.1
TonB-dependent receptor.
  
 
 0.872
SFE85124.1
OmpA family protein.
   
 
 0.852
SFF34622.1
Protein of unknown function.
  
    0.771
SFF24341.1
CarboxypepD_reg-like domain-containing protein.
 
   0.770
SFE57360.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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