STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF25757.1Acetyltransferase (GNAT) domain-containing protein. (326 aa)    
Predicted Functional Partners:
SFF25772.1
Glyoxalase-like domain-containing protein.
       0.773
SFF25743.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
       0.746
SFF25698.1
CarboxypepD_reg-like domain-containing protein.
 
     0.638
SFF25714.1
Hypothetical protein.
       0.600
SFF25726.1
Hypothetical protein.
       0.600
SFF31065.1
Hypothetical protein.
  
     0.557
SFF25684.1
Tellurium resistance protein TerZ.
       0.483
SFE64701.1
Hypothetical protein.
  
     0.468
SFE40109.1
Hypothetical protein.
  
     0.454
SFF20464.1
DNA-binding beta-propeller fold protein YncE.
  
     0.409
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.