STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF25787.1Hypothetical protein. (1627 aa)    
Predicted Functional Partners:
SFF49112.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.573
SFE43113.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.570
SFF04956.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.569
SFF25803.1
Exonuclease SbcC.
       0.555
SFF36235.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.551
SFE85719.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.533
SFF13813.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.529
SFE87987.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.519
SFF28494.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.518
SFF42870.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.495
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.