STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF30345.1Protein of unknown function. (205 aa)    
Predicted Functional Partners:
SFF30308.1
Hypothetical protein.
 
   0.999
SFF46292.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SFF30362.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
  0.998
SFF30326.1
Cytochrome c, mono-and diheme variants.
 
 
   0.991
SFF30380.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
  0.984
SFF30404.1
Cytochrome c, mono-and diheme variants.
 
 
   0.978
SFF30293.1
Cytochrome c oxidase subunit 2.
  
  0.730
SFF30279.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  0.723
SFF29443.1
Cytochrome c.
  
 
 0.707
SFF32743.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.701
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.